The collection

Every essay — page 3

One idea per essay, ordered so that the earlier ones set up the later ones — but nothing here depends on being read in sequence. Page 3 of 3.

What a plant might be doing

Turing's last work was on this, and it was unpublished when he died: a ring of cells, two diffusing substances, and a spacing that selects itself. The modern account uses auxin and a pump that works uphill. Both are made to predict a number and then to produce it.

-0.50000.500125810131621242629lag, in internodescorrelation between a divergence and the one that many internodes laterrefusedmain 0.029 · band 0.073the shaded strip is the sampling bandkinematic lattice · 759 anglesgenerated from a stated rule, not drawn to look right

A disturbance with a memory

The previous phase's control assumed that a plant's errors are independent from organ to organ, and nobody had tested it. Give the errors a memory — each one a fraction of the last, up to a coefficient of 0.97 — and the comb does not appear. The obvious threat to the result turns out to be empty, and the algebra says why before the measurement does.

12 figures
-0.50000.500125810131621242629lag, in internodescorrelation between a divergence and the one that many internodes later816245132129reads 8/13 · no rule in itmain 0.514 · band 0.073the shaded strip is the sampling bandkinematic lattice · 759 anglesgenerated from a stated rule, not drawn to look right

Errors that pass between organs

An organ's neighbours are the ones eight and thirteen places back — that is what a parastichy pair is. So a disturbance transmitted by contact is correlated at exactly the two lags the readout examines, and it does not have to be told them. Driven into a lattice with no rule in it, it returns the counted pair on eight stems out of eight.

12 figures
0.4000.6000.80011.201.40-0.30100.1760.3010.4770.699how much more strongly the error is inherited from the 8-neighbour than from the 13-neighbourthe second comb's strength as a fraction of the main comb'sthe placement rule: 0.65equal combs1:21:11.5:12:13:15:1at 3:1 the ratio is 0.75kinematic lattice · 3 seeds a pointgenerated from a stated rule, not drawn to look right

What a forgery has to know

A lattice with transported errors reproduces the comb and the pair, so one quantity is left: the two combs' relative strength. Weighted by distance the forgery puts more in the second comb than the first; the rule does the opposite. It matches only if the coupling is turned three to one towards the further neighbour, which no falloff supplies.

12 figures

Shells and growth

A logarithmic spiral is what a thing grows into when it adds material without changing shape. Its one parameter is recoverable from any drawn curve, which is how a century-old argument gets a number attached to it.

Packing and tiling

How evenly a pattern fills its disc is a statement about cell areas, and it can be measured four ways that disagree. Cells average six sides because Euler's formula leaves them no choice.

5 sides13420%6 sides45869%7 sides7311%665 bounded cellsmean 5.908 sidessix is forced, not chosen

Why the average cell has six sides

Not because hexagons are efficient. Because Euler's formula leaves a tiling no choice — count the edges two ways and the mean comes out at six, whatever the cells would prefer. The efficiency argument is a different claim about a different thing.

6 figures
00.2500.5000.7501120130140150divergence angle (°)closest pair, as a fraction of the mean spacing (higher is better)137.508°400 points per anglethree criteria, three winners

Packing, measured four ways

The claim is that the golden angle packs best. It is measurable, and the measurement gives three different winners on three criteria — all near 137.5° and none of them it. That does not make the claim wrong; it makes the usual statement of it wrong.

8 figures
02.5057.50105001e+31.5e+32e+3number of primordialargest empty gap, in units of the mean spacing137.508° (golden)137.3°135° = 3/8 of a turngaps measured from the triangulationan asymptotic claim, not a contest

The gap that grows

A rational divergence angle develops an empty wedge that grows without bound as the head fills — a factor of nearly four between two hundred primordia and sixteen hundred. An irrational one does not. That is the statement about the golden angle that survives measurement.

6 figures
00.500155.5066.507sides of the cellarea, as a multiple of the mean cell areaLewis161 interior cellsslope 0.014 against 0.25

Lewis's law wants disorder

Cell area rises linearly with side count — measured on cucumber epidermis in 1928 and quoted ever since as a property of packed tissue. It holds beautifully on a random point set, with a fitted constant of 1.64 against Lewis's 2. On a phyllotactic head it does not hold at all: the slope is 0.009, and area and side count are almost independent.

6 figures
Lewis slope — golden head0.009the law says 0.25Lewis slope — random set0.231the law says 0.25Aboav a — golden head1.177the law says 1.2Aboav a — random set0.593the law says 1.2filled where the tiling obeys the law it is being judged by900 points in each tilingLewis explains 32% of the area spread at best

Two laws that want opposite tissue

Lewis's law and Aboav's relation are quoted side by side as properties of cellular tissue. Measured on the same two tilings they point opposite ways — the ordered head satisfies Aboav's with the textbook value of 1.18 and fails Lewis's completely; the random set does exactly the reverse.

6 figures
mean sides per cell(forced to six)mean squared departure from six(not forced)whorled, 144°5.9860.023golden, 137.508°5.9900.253rational, 137.5°5.9900.255Lucas, 99.502°6.0360.255137.0°5.9900.291Poisson5.9691.830six433–637 interior cells each, inside 86% of the radiussame cells, same cut, two statistics

The second moment is the measurement

The mean number of sides in a cellular tissue is six, and Euler's formula leaves it no choice — so it takes the same value on a golden-angle head, a whorled head and a set of random points. The mean squared departure from six varies by a factor of eighty across the same three, and almost nobody reports it.

11 figures
a window on the head, 60% of its widthshare of all cell contactsby difference in placement index3431%5527%2117%8915%136%82%counted:34 and 55665 nodes · 1903 contacts · 5.72 per nodecoordinates in placement order, nothing else

The six are the spirals

Label every contact between two cells in a seed head with the difference between the two nodes' placement indices. The labels are the parastichy numbers — 34, 55, 21, 89 — and the six sides Euler forces turn out to be about two from one family, one and a half from the next, and one each from two more.

12 figures
00.2000.4000.600137138138139divergence angle, degreesμ₂, the mean squared departure of a cell's side count from six5/138/2113/34261 angles · 0.0062° apart · 300 points eachmarks are the fractions, placed from arithmetic

The disorder is a staircase

Sweep the second moment of a head's side-count distribution across the divergence angle and it is not a curve. It is flat in stretches with sharp steps between them and narrow deep dips wherever a rational falls — so 0.253 is not the golden angle's number, it is the number of every angle from 137.47° to 137.54°.

9 figures
00.2000.4000.600-3-2.50-2-1.50-1-0.700offset from the rational, log₁₀ of degreesμ₂300 points600 points1200 points5/13 of a turn · 12 offsets · vertical rules are the half-widthsgenerated from a stated rule, not drawn to look right

A dip belongs to the head

At an exact rational the disorder halves when the head doubles, and the dip around it narrows by a factor of four. So which angles look ordered is set by how many organs were counted, and a head of three hundred cannot tell 138.4615° from 138.48° while a head of twelve hundred tells it from 138.4625°.

11 figures
00.2000.400-0.400-0.300-0.200-0.10000.1000.2000.3000.400degrees from 21/55, at 137.4545°μ₂, the second moment of the side-count distribution13/34the background from the clear offsets: 0.339the old single sample: 0.11521/55 · head of 825generated from a stated rule, not drawn to look right

The background is not one sample

The dip in disorder at a rational angle is a comparison against a background, and the background was one measurement taken two tenths of a degree away. At 21/55 that lands seven thousandths of a degree from 13/34 — inside another rational's dip — and the comparison inverts. Fixed, the dip survives to a denominator of 89.

12 figures
33.504divergence angle, as a fraction of a turnn²·w, the coefficient of the width law (logarithmic)11881285299970059125142973/85/138/2113/3421/5534/89spread 12.0 across the sixsix denominators · n²·wgenerated from a stated rule, not drawn to look right

The width carries the denominator

The previous phase measured three denominators, found the dip's half-width falling as the square of the head size, and could not say whether its coefficient depended on the denominator. Six denominators say it does: the coefficient runs from 1,188 at q = 8 to 14,297 at q = 89, and dividing by q flattens a factor of twelve into a factor of two.

12 figures

The claims, measured

The nautilus, the sunflower and the golden angle arrive with more confident wrong statements attached than any other subject on this fleet. Each one gets a test and a number — including the one that turns out to be right.

golden 137.51°55 and 89FibonacciLucas 99.50°47 and 76Lucas151.14°50 and 81neither77.96°37 and 60neithercounted from the pointsone sequence per branch

Fibonacci is a branch, not a law

Fibonacci counts come from one branch of the model. The Lucas branch — which the same rule reaches at a different growth rate — gives 47 and 76, and neither is a Fibonacci number. The sequence is a consequence of an angle rather than a property of plants.

7 figures
00.2000.400100120140160divergence angle (°)resistance to rational approximation (higher is more irrational)1/√5 — the bound137.508° — 0.438938 angles on a 0.08° grid, plus the golden angle exactlythis claim is sharp

The claim that survives

Of the three famous assertions about this subject, one is out by a factor of two, one is true of a branch rather than of plants, and one is right — in a sharper form than the version usually told, and about arithmetic rather than about packing.

12 figures
5/107.9%5 × 1/23/67.9%3 × 1/22/46.1%2 × 1/24/85.5%4 × 1/27/145.2%7 × 1/26/122.8%6 × 1/28/160.1%8 × 1/2share of divergences at this riserise 0.008 · 3600 divergences35.4% share a factor

What "whorled" was hiding

The expansion phase's census put 35% of divergences in a bucket labelled whorled and moved on. Opened, every pair in it is k and 2k — the coarsest rung of the ladder, repeated k times — and reading the census up to jugacy takes the Fibonacci share from 14.7% to 50.1% without describing a single extra plant.

8 figures
Fibonacci59.6%Lucas20.8%whorled10.7%other8.9%5 distinct pairs over 1200 divergencesrise 0.100Fibonacci 59.6%

How often is it Fibonacci

The claim that plant spirals come in consecutive Fibonacci numbers is stated as a near-universal. Asked of the geometry, the answer collapses with scale — at a coarse rise 67% of divergences give Fibonacci pairs, and at a fine one 15%, with whorled and unnamed pairs taking the rest.

9 figures
-2-1.50-1-0.500100120140160180divergence angle (°)log₁₀ of the rise between nodes1,2,32,3,522 × 150 lattices, each solved196 runs drawn

The angle is not the object

Every popular account of phyllotaxis is organised around a number. After a phase spent on stems, forks and frequencies, the number looks like the wrong thing to organise an account around — it is the limit of one path through a branching structure, it is at no fork, and a plant that has it got there by not jumping.

8 figures
-10111.5022.503product of the two counts, log₁₀angles left open, log₁₀ °2/33/55/88/1313/2121/3434/557 pairs · edges found by bisectionwidth × mn = 221°

What a count is worth

A reported parastichy pair pins the divergence angle to a band 221°/mn wide — so 2 and 3 says almost nothing and 34 and 55 fixes it to a tenth of a degree. Every rung of the ladder is worth a factor of φ², and the counting radius this collection has asked published counts for since its foundation adds ten per cent.

6 figures
00.2500.5000.75015101520specimenschance of detecting it14 specimens90%exact binomial · one-sided at α = 0.0514 specimens, cut at 5

How many plants would it take

Fourteen specimens separate the geometry's Fibonacci share from a coin weighted to a half. Four separate it from what a grown history gives. One fir cone measured at three rings settles whether its ladder is spaced as a cone's or an ogive's. The sample sizes are small, and that is the uncomfortable part.

7 figures
plants show consecutive Fibonacci pairs far more…4and more often even than a coin weighted to a half14a conifer cone's rings are spaced as a cone rather…1multijugate patterns are a real minority rather than…34against 14.7%, if the truth is 90%needs: the pair, at a stated rungagainst 14.7%, if the truth is 50%needs: the pair, at a stated rungagainst φ² = 2.62, if the truth is φ^(2/1.88) = 1.67needs: three ring positions, to ±3%against 2%, if the truth is 15%needs: the pair; the whorl's symmetryspecimens neededexact binomial · α = 0.05 · power 0.91 to 34 specimens

The survey this site cannot do

Four phases of asking for a dataset, and it is still not here. What this phase can do instead is specify it — the fields, the sampling, the sizes, and which of this collection's claims each one would settle. Two of the four fields asked for turn out to be worth less than the asking implied, and one was never asked for at all.

11 figures
00.2500.5000.750100200300internodes counted on one stemsmallest difference in correlation the count can resolvethe difference to resolve — 0.7656 internodesmatched at 0.75° of scatterone stem, counted once

The test a plant could settle

Every other open question in this collection is priced in tens of specimens, and one of them in a hundred and sixty. This one is priced in internodes on a single stem, and the number is fifty-six — because it is a statistic of one sequence rather than a share of a population.

10 figures
-0.20000.2000.4000.6000.5000.75011.251.50divergence scatter, in degrees — the one quantity a plant offerscorrelation between one divergence and the nextplacement noisejostle noisefield noise4 runs per point · band ±0.13every point is a lattice

What a quiet plant is worth

Almost every measurement gets easier as the effect gets larger. This one gets harder — a stem's divergence sequence stops carrying information about its noise at precisely the scatter where the noise becomes obvious. The specimens worth measuring are the ones that look least interesting.

8 figures
00.2000.4000.6000.80000.50011.502reading error on each organ's position, in degreesheight of the peak at the parastichy numberwhat noise alone givesthe threshold a reading must clear5/5 right5/5 right2/5 right1/5 right1/5 rightpredictedrise 0.008 · 5 runs · pattern scatter 0.75°peak × σ²/(σ² + 2ε²), nothing fitted

What the protractor has to be

The readout that names the parastichy number costs sixty internodes, which is cheap. It also needs every organ's position measured to better than a quarter of a degree, which is not — and the requirement follows from arithmetic rather than from care, so no amount of averaging relaxes it.

11 figures
mean sides per cell(forced to six)mean squared departure from six(not forced)whorled, 144°5.9860.023golden, 137.508°5.9900.253rational, 137.5°5.9900.255Lucas, 99.502°6.0360.255137.0°5.9900.291Poisson5.9691.830six433–637 interior cells each, inside 86% of the radiussame cells, same cut, two statistics

What a summary throws away

Four statistics this collection has relied on turn out to be incapable of varying with the thing they describe — one is invariant to shuffling, one is fixed by a theorem, one is a parameter that stopped mattering, one is a fitted number selected into being wrong. In each case the second statistic was free and nobody had taken it.

11 figures
0123451502504007601.1e+3internodes measured on one stemstems out of five returning the counted pairno reading error0.25° per organ0.5° per organ0.75° per organrise 0.005 · disturbance 0.25 · pattern scatter 0.70°generated from a stated rule, not drawn to look right

What the pair costs

The single parastichy number cost sixty internodes. The pair costs two hundred and fifty, and a protractor error of three quarters of a degree takes it to eleven hundred. The arithmetic that predicts the second of those is right about the shape and wrong about the scale by a consistent factor, which is recorded rather than fitted away.

9 figures
00.2000.400138138divergence angle, degreesμ₂, the mean squared departure of a cell's side count from six8/2113/34golden angle · μ₂ = 0.25367 angles · 0.0200° apart · 900 points eachmarks are the fractions, placed from arithmetic

The most irrational is not the most disordered

If rational angles make ordered tissue, the most badly approximable angle should make the most disordered — which would at last give the golden angle a criterion it wins. Swept across the interval it is the most irrational point of, μ₂ peaks at 138.42° and the golden angle sits unremarkably in the middle.

9 figures
012345-1.70-1.30-1-0.824-0.602-0.398-0.222disturbance amplitude, degrees of azimuth per nodestems out of five returning the counted pair0.020.050.10.150.250.40.6lag-one correlation = 0lag one, on the same sequencesrise 0.005 · 5 stems per point · bars are the pair, line is lag onefilled where the pair agrees with the position counter

What a refusal does not say

The readout can decline for four different reasons — too quiet, too disturbed, too fast, or a window in the wrong place — and a stem that returns nothing does not say which. That is the third time this thread has failed to close the mixture problem, and the first time the failure has a shape.

11 figures
-0.50000.50011.502-2.30-2-1.50-1-0.5000disturbance, in degrees of azimuth (logarithmic)the scatter a protractor would record, in degrees (logarithmic)no lattice left above here3 of 5 silent3 of 5 silent400 nodes a rung · five stems a pointgenerated from a stated rule, not drawn to look right

A refusal with a reason

Three phase plans running have recorded that a refusal has four causes and the sequence separates none of them. With a second window and a protractor, three are separated: silence at 0.38° of scatter is a quiet plant, silence at 56° is a disorderly one, and agreement certifies the rate. The fourth survives, and so does a worse discovery — agreement is not correctness.

12 figures
stemwhat the angles say18/10not the lattice's pair28/12not the lattice's pair3refused48/10not the lattice's pair58/12not the lattice's pair68/12not the lattice's pair78/12not the lattice's pair88/11not the lattice's pairthe positions say 8/13kinematic lattice · error of period 8generated from a stated rule, not drawn to look right

The control a survey would need

A comb no longer shows that a plant computes its pattern, so the survey this site has been specifying for five phases has to change. What it loses is its headline; what it gains is a measurement a botanist can actually make — six requirements, four of them already in the specification, and a quantity nobody has ever reported.

12 figures