What a plant might be doing

The forgery needs a history

A disturbance passed between touching organs manufactures the comb, the second comb and the parastichy pair on an arrangement with no rule in it — which is why the comb stopped being evidence. Give the organs the same correlation with no accumulation in it and the forgery collapses: one seed in eight returns a pair, and the comb is the noise floor.

Worth reading first: Errors that pass between organs · A disturbance with a memory · The sequence has a memory.

The comb in a divergence sequence was offered here as evidence that a plant computes its pattern rather than merely having one. It stopped being that when a kinematic lattice — organs at exact multiples of a divergence, no rule anywhere — was given errors inherited from its contact neighbours and reproduced the comb, the second comb and the pair on eight seeds of eight.

The conclusion drawn was that a comb is evidence that something is transmitted between neighbours, of which a placement rule is one instance. This essay narrows that, because the transmitted disturbance was doing two things and only one of them turns out to be necessary.

The comparison

Two disturbances, the same size, at the same coupling, on the same eight seeds, driven into the same kinematic lattice.

The inherited one is the original: each organ takes a share of what its two contact neighbours were displaced by. The shared one takes the same share of the fresh deviates those neighbours received — the same correlation at the same two lags, with nothing handed on twice.

Same correlation at the contacts, and only one of them has a historyThe autocorrelation of each disturbance against lag, over 40,000 draws at a coupling of 0.5. Both are correlated at 8 and 13 — the two contact offsets of a stem at this rise — and at 5, their difference, which is where the second comb comes from. The inherited disturbance, in which an organ takes a share of what its neighbours were displaced by, also carries power at 16, 21, 26, 29, 34: every sum and difference of the two offsets, because an error that enters it is passed on again and again. The shared disturbance, in which an organ takes a share of the fresh deviates drawn for those neighbours, carries nothing past the two. The number on the right is how far each one's block means wander: over 100 organs the inherited stream's block means have 5.5 times a white stream's variance and the shared one's 2.2.inherited againcoupling 0.5drift ×5.5shared oncecoupling 0.51235813162124262934drift ×2.2correlation against laglag, in organs40,000 draws · offsets 8 and 13generated from a stated rule, not drawn to look right
Fig. 1 The two disturbances as they go in. Identical structure at the contact offsets and at their difference, where the second comb lives; the inherited one alone carries power at every combination of the two, and its block means wander five times as much.

The result

The inherited disturbance forges everything. Main comb 0.205 against a band of 0.073, second comb 0.242, and the pair returned as 8/13 on eight seeds of eight, with a recorded scatter of 0.73°.

The shared disturbance forges nothing. Main comb 0.099 — the band is 0.073 — second comb 0.098, and the pair returned on one seed of eight, at a recorded scatter of 0.71°.

The damage is the sharing; the forgery is the historyThree disturbances of the same size, measured four ways. The two left columns are stems grown by the placement rule and jostled at 0.25° per organ: a disturbance shared between the contact neighbours scatters the lattice by 0.71° against white noise's 0.57°, and one inherited from them — the same sharing, passed on again at every organ — by 0.97°. The two right columns are kinematic lattices with no rule in them at all, where the whole question is what a disturbance can manufacture. The inherited one returns the pair on 8 seeds of 8 with a main comb of 0.205 against a band of 0.073; the shared one, at the same coupling and the same scatter, returns it on 1 and makes a comb of 0.099, which is the band. So sharing an error with the organs you touch does the damage, and only passing it on and on forges the evidence.scatterthrough the rulecomb ratiothrough the rulemain combforged, no ruleseeds agreeingforged, no ruleindependent0.57°0.80shared once0.71°0.910.101/8inherited0.97°1.020.218/8same coupling, same offsets 8 and 13, same eight seedsrule at 0.25° a organ · forged at the same couplinggenerated from a stated rule, not drawn to look right
Fig. 2 The two columns on the right are the forgery. Same coupling, same offsets, same scatter, and the inherited disturbance reads the pair on every seed while the shared one reads it on one — with a comb that is the noise floor rather than a signal.

Same lags, same coupling, same recorded scatter, opposite verdicts. The forgery is the accumulation, not the structure.

It is not a matter of size

The obvious objection is that the shared disturbance is simply weaker — a moving average is a milder object than a recursion, and the comparison was made at a coupling where the transport barely works.

The objection is testable and it fails. Push the shared disturbance to a coupling of 0.7 and its main comb is 0.114 on two seeds of eight. Push it to 0.9 — a coupling the transport cannot even be run at, since its recursion diverges there and the stream has no variance to normalise by — and the main comb is 0.109 on two seeds of eight.

So the shared disturbance is at the noise floor at every coupling it can be given, including couplings the inherited one cannot survive. Its failure to forge is not a failure to be large enough.

A lattice with an error inherited from the two contact neighboursThe autocorrelation of 759 divergence angles from a kinematic lattice at a divergence of 137.8261° and a rise of 0.005, with 0.5° of scatter on each azimuth. There is no placement rule anywhere in it: node i is put at exactly i times the divergence and then displaced. The only thing that differs between this figure and the control is the structure of the displacement — here, an error inherited from the two contact neighbours at coupling 0.5. The largest comb mean is 0.166 against a sampling band of 0.073, and the readout returns 8/13.-0.50000.500125810131621242629lag, in internodescorrelation between a divergence and the one that many internodes later816245132129reads 8/13 · no rule in itmain 0.166 · band 0.073the shaded strip is the sampling bandkinematic lattice · 759 anglesgenerated from a stated rule, not drawn to look right
Fig. 3 The forgery that works, at the coupling both are compared at. The teeth stand well clear of the band, and every seed produces them — which is what makes it a forgery rather than a fluctuation, and what the shared disturbance does not do at any coupling.

Why re-transmission is what a comb needs

The reason is in what the readout looks at, and it is arithmetic rather than empirical.

The comb is not a peak at one lag. It is a residue class: the readout finds the lags at which the divergence sequence’s autocorrelation stands above its band, and what makes a comb is that they are the multiples of one number — eight, sixteen, twenty-four, thirty-two — rather than a single tooth at eight.

The same lattice with no rule in itA cylindrical lattice at a divergence of 137.826° and a rise of 0.005, built by placing node i at exactly i times the divergence and then displacing each azimuth independently by 0.5°. Its photograph is the photograph of the stem in the figure beside it and its parastichy pair is the same pair. The largest comb mean in it is 0.03 against a sampling band of 0.07, and the readout refuses.-0.50000.500125810131621242629lag, in internodescorrelation between a divergence and the one that many internodes laterno comb clears the bandlargest mean 0.03 · band 0.07the shaded strip is the sampling bandkinematic lattice · 759 divergences · 0.5° of independent scattergenerated from a stated rule, not drawn to look right
Fig. 4 The teeth, on a forged stem. The main comb is a whole family of lags at multiples of the smaller parastichy number, and the second is the family offset by the difference of the pair. A readout that looked at one lag would find something in almost anything.

A moving average over lags eight and thirteen puts correlation at eight, at thirteen and at five. It puts none at sixteen, twenty-four or twenty-one, because organ i and organ i−16 share no innovation: the terms of the first are at i−8 and i−13, and of the second at i−24 and i−29.

A recursion does. Organ i contains a share of organ i−8’s error, which contains a share of organ i−16’s, which contains a share of organ i−24’s, and so on down. The whole residue class is populated by the recursion and only by the recursion.

So the comb is not evidence of correlation at the contact offsets. It is evidence of correlation at the multiples of them, and only a process that hands a disturbance on and on produces that.

Which arrangements carry a comb, and what each one reportsThe largest comb mean in five arrangements at a rise of 0.005, all read by the same instrument at the same length, with the sampling band of 0.073 marked. Only the first is a placement rule; the other four are kinematic lattices with no rule in them, differing from one another only in how their azimuth errors are structured. Independent errors and errors with a memory leave nothing to read. A repeating error puts up a comb and names a partner that is not the lattice's. Errors inherited from the contact neighbours reproduce both the comb and the pair.three sampling bandsthe placement rule0.6428/13independent errors0.031refusedan error with a memory0.014refusedan error that repeats0.4338/10, 8/12errors passed between neighbours0.5538/13one rule, four kinematic latticesgenerated from a stated rule, not drawn to look right
Fig. 5 Which spacings the readout finds, on the arrangements that have any. A comb is a family of lags rather than a tooth, and the family is what a repeated transmission builds.

The arithmetic, worked

It is worth doing the bookkeeping once, because the conclusion is a statement about which lags exist and that can be checked by hand.

Write e for the fresh deviates and v for what an organ ends up displaced by.

The shared disturbance is v(i) = a·(c₈·e(i−8) + c₁₃·e(i−13)) + b·e(i). Every v is a combination of exactly three innovations. Two organs’ displacements are correlated only if their sets of three overlap, and the overlaps are: lag 8 (e(i−8) against e(i−8) from the other’s own term), lag 13 likewise, and lag 5, where organ i’s e(i−13) is organ i−5’s e(i−18)… no, precisely: organ i−5 contains e(i−13) and e(i−18), and organ i contains e(i−8) and e(i−13). They share e(i−13). That is the whole list. At lag 16 organ i−16 contains e(i−24) and e(i−29) and shares nothing.

The inherited disturbance is v(i) = a·(c₈·v(i−8) + c₁₃·v(i−13)) + b·e(i), and each v on the right expands into its own three terms, which expand again. Organ i’s displacement therefore contains e(i−16) through the chain i → i−8 → i−16, and e(i−21) through i → i−8 → i−21, and so on for every sum of eights and thirteens.

So the two streams’ correlation functions are: three lags for one, and every non-negative combination 8a + 13b for the other. The readout looks for a family of lags at the multiples of a number. Only one of the two objects has one.

That also explains the measured numbers rather than merely accompanying them. The shared stream’s correlation at lags 16, 21, 24, 26, 29 and 34 is 0.000, 0.002, 0.008, 0.002, 0.004 and 0.006 — zero to the precision of forty thousand draws — and the inherited stream’s is 0.175, 0.298, 0.081, 0.176, 0.170 and 0.172.

The second comb goes too

The main comb is the headline, and the second comb is the one that mattered longest, so it is worth its own paragraph.

The second comb is the family of lags offset from the main one by the difference of the pair — the residue class containing thirteen when the main class is the multiples of eight. Both streams are correlated at that difference: it is lag five, and the arithmetic above shows both objects populating it.

Measured: the inherited disturbance’s second comb is 0.242 and the shared one’s is 0.098, against a band of 0.073. So the shared disturbance does not manufacture a second comb either, despite carrying the correlation that a single-lag account would say produces one.

The reason is the same. A comb is a residue class rather than a tooth, and the second class needs 5, 18, 21, 26 and so on — which again requires the chain.

That is worth recording because the second comb is the observable this site spent a whole phase pricing, refining and eventually retiring. Its behaviour here is one more piece of evidence that it was always about the same property as the first: not “are the contacts correlated” but “does the correlation propagate”.

The two combs, in the proportions the rule gives themThe ratio of the second comb to the main one, for a kinematic lattice whose errors are inherited from its two contact neighbours, against how unevenly that inheritance is split. The horizontal line is where the placement rule's own stems sit, at 0.65. Weighted by distance — the coupling a d⁻³ interaction would give, which at this rise favours the 13-neighbour by 1.26 to one because the 13-hop is the shorter — the forgery sits at 1.46, well above the rule. It reaches the rule's value only at about 3 to one the other way, which is a factor of 4 against what distance supplies and in the opposite direction.0.4000.6000.80011.201.40-0.30100.1760.3010.4770.699how much more strongly the error is inherited from the 8-neighbour than from the 13-neighbourthe second comb's strength as a fraction of the main comb'sthe placement rule: 0.65equal combs1:21:11.5:12:13:15:1at 1:1 the ratio is 1.19kinematic lattice · 3 seeds a pointgenerated from a stated rule, not drawn to look right
Fig. 6 The ratio of the two combs, the quantity that was the last discriminator and is now retired. Both combs come from the same property of a disturbance, which is part of why their ratio turned out to follow the disturbance rather than the rule.

What that does to the evidential position

The position after the forgery was found had three lines. It now has three different ones.

A comb is still not evidence of a placement rule. The transported disturbance manufactures one and contains no rule. That stands.

But a comb is evidence of something stronger than “transmission”. It requires a process in which an organ’s disturbance reaches organs many contacts away — not merely its neighbours, but its neighbours’ neighbours, down a chain of eight or sixteen or twenty-four organs. A process in which each organ is jostled by what arrived at its neighbours, and no further, makes no comb at all.

And the class of rivals is narrower than it looked. “Errors are correlated between touching organs” is a very weak hypothesis, satisfied by almost any mechanical coupling. “Errors are inherited, so that a displacement propagates along a parastichy for dozens of organs” is a specific claim with its own consequences — the most obvious being the slow drift, which is measurable in a divergence sequence without any comb at all.

Transported errors report the same pair every timeeight kinematic lattices, differing only in the seed of their disturbance, each read by the same instrument. The disturbance at each node is inherited from the nodes 8 and 13 places back, at a coupling of 0.5. Every stem returns 8/13, which is the pair the positions give and the pair the placement rule's own stems give. There is no placement rule in any of these arrangements.stemwhat the angles say18/13the lattice's own pair28/13the lattice's own pair38/13the lattice's own pair48/13the lattice's own pair58/13the lattice's own pair68/13the lattice's own pair78/13the lattice's own pair88/13the lattice's own pairthe positions say 8/13kinematic lattice · inherited errorgenerated from a stated rule, not drawn to look right
Fig. 7 What the surviving rival looks like as a readout: the same pair on seed after seed, at a strength a real stem’s comb has. The narrowing in this essay does not remove it — it says what a plant would have to be doing for it to be the explanation.

One seed in eight, which is a warning about single stems

The shared disturbance returned the pair on one seed of eight. That is not nothing, and it is worth saying what it means for an experiment rather than letting it pass as a rounding error.

The readout refuses when it cannot find a clear enough comb, and it returns a pair when it can. On an arrangement that manufactured nothing, one stem in eight still produced a clear enough comb by chance to return 8/13 — the correct pair, which is the awkward part: a false positive here does not look like nonsense, it looks like a confirmation.

That is a rate of about 12% per stem, measured on a control that is known to contain no signal at all. So a comb read off one stem is not evidence of very much, whatever it says; the strength of the original forgery result was that it reproduced on every seed, and the strength of this one is that its control does not.

The site’s own specification for a survey has always asked for tens of specimens rather than one, on separate grounds — how many are needed to pin a divergence, or to tell two accounts apart. This is a third reason with a different shape: the instrument itself has a false-positive rate, and the only way to see it is to run the control many times.

Every open question here needs under 34 specimensThe sample size at which each comparison reaches 90 per cent power at a 5 per cent false-positive rate, from the exact binomial rather than a normal approximation. The census question — do plants show consecutive Fibonacci pairs far more often than the geometry does — needs 4: 14.7% is the share of divergence angles giving a consecutive Fibonacci pair at a fine rise; 90% is what a grown history gives.plants show consecutive Fibonacci pairs far more…4and more often even than a coin weighted to a half14a conifer cone's rings are spaced as a cone rather…1multijugate patterns are a real minority rather than…34against 14.7%, if the truth is 90%needs: the pair, at a stated rungagainst 14.7%, if the truth is 50%needs: the pair, at a stated rungagainst φ² = 2.62, if the truth is φ^(2/1.88) = 1.67needs: three ring positions, to ±3%against 2%, if the truth is 15%needs: the pair; the whorl's symmetryspecimens neededexact binomial · α = 0.05 · power 0.91 to 34 specimens
Fig. 8 The sample-size arithmetic this site has been building for the survey it cannot do. A per-stem false-positive rate of about an eighth on a null arrangement is the kind of number that decides how many stems a claim about combs would need.

A test a plant could fail

The narrowing is worth something because it is checkable on a stem rather than in a model.

If a plant’s disturbances are inherited, the divergence sequence carries a slow wander as well as a comb: block means over a hundred organs vary several times more than independent errors would allow. If they are merely shared between touching organs, the sequence has teeth at the contacts and no wander.

That is two statistics off one sequence, and this site has already priced what a sequence costs: about nine hundred organs at half a degree of protractor precision for a comb. The wander is cheaper — it is a variance ratio, not a spectral feature — so a stem long enough for the comb is more than long enough for both.

What the pair costs, at a rise of 0.005Five seeded stems at each length, read at four protractor errors. With no reading error the pair needs 250 internodes — against the sixty the single parastichy number costs. At 0.25° per organ it needs 250; At 0.5° per organ it needs 400; At 0.75° per organ it needs 1100. The pattern's own scatter here is 0.70°, so the last of those is a reading error larger than the signal being read.0123451502504007601.1e+3internodes measured on one stemstems out of five returning the counted pairno reading error0.25° per organ0.5° per organ0.75° per organrise 0.005 · disturbance 0.25 · pattern scatter 0.70°generated from a stated rule, not drawn to look right
Fig. 9 What reading a sequence costs in organs and in protractor precision. The second statistic proposed here is read off the same measurements, so it adds nothing to the cost of an experiment already specified.

And the two hypotheses disagree about it. A placement rule produces neither: its errors are corrections rather than inheritances, and its divergence sequence is anticorrelated at lag one rather than drifting. So a stem with a comb and no drift is evidence for the rule against the transport, which is an observable this site did not have a week ago and lost the previous one to.

The memory of a divergence sequence, at 0.75° of scatterWith no noise at all the lag-one correlation is 0.54: the rule corrects itself, so a lattice arrives with a memory in it. Matched at the same recorded scatter, placement noise leaves -0.04, jostle noise leaves 0.65, field noise leaves 0.50. The band is ±0.13, which is what an uncorrelated sequence of this length gives.-0.25000.2500.500123456lag, in nodescorrelation between a divergence and the one that many nodes laterno noiseplacement noisejostle noisefield noisesampling band3 runs each · 243 divergences per runmatched at 0.75° of scatter
Fig. 10 The rule’s own signature in a sequence: strong anticorrelation at lag one, which is a restoring force rather than an inheritance. A transported disturbance has no such thing, and a sequence carrying both a comb and this is not something a transport can produce.

What a plant would have to be doing

It is worth stating the surviving rival as a claim about a meristem rather than as a property of a stream, because the narrowing changes what it would take to believe it.

The weak version — organs that touch share their errors — is nearly free. Two primordia in contact are mechanically coupled; if one is displaced, the other is displaced a little. Almost any tissue satisfies it, and it is the version most people would assent to without thinking.

The version that forges a comb is not free. It requires that when organ i is displaced, the displacement it passes to organ i+8 is passed on again to organ i+16, and again to i+24, with only a slow decay. A displacement entering the apex would then be detectable dozens of organs later, along a parastichy, having travelled around the stem several times.

That is a claim about the tissue with consequences beyond phyllotaxis, and it is the kind of claim an anatomist could have an opinion about. It also has an awkward corollary: a mechanism that propagates displacements that far would tend to accumulate them, and an apex that accumulated displacements for a hundred organs would not have a lattice left — which is roughly what the measurements show, since the transported disturbance destroys a lattice at half the amplitude white noise does.

What this does not say

It does not restore the comb as evidence of a rule. It restores part of the comb’s evidential value against one specific class of rival — the one where sharing is local and does not propagate — and leaves the propagating version exactly where it was.

It does not say plants share errors rather than inherit them. Nothing here measures a plant. If anything the physically natural version is the inherited one, which is why it was written first.

The ratio follows the disturbance, not the ruleThe ratio of the second comb to the main comb on stems grown by the placement rule and jostled by seven different disturbances, all at 0.25° of displacement per organ and all on the same rule. Independent errors and errors with a memory return 0.76–0.81, which is the value this site measured for the rule. A periodicity at the smaller parastichy number takes it down to 0.45; errors inherited from the contact neighbours take it up to 1.09, most of the way to the 1.24 a transported disturbance gives with no rule in it at all. So the quantity separates arrangements by how their errors are related, not by whether anything computed the positions.second comb ÷ main comb, at 0.25° of displacementthe rule, 0.79no rule at all, 1.24independent0.80a memory, ρ = 0.50.78a memory, ρ = 0.90.76a memory, ρ = 0.970.81repeating every 80.45inherited, a = 0.51.02inherited, a = 0.71.095 stems a row · rise 0.005generated from a stated rule, not drawn to look right
Fig. 11 The observable this thread retired, for context. The ratio of the two combs moves with the colour of the disturbance on arrangements that all contain the same rule, which is what took it out of service — and nothing in this essay brings it back.

And it does not depend on the coupling being small. The result is stated at the coupling where the transport works and repeated at two couplings where it does not, precisely because a control that only wins in a narrow range is not a control.

The check

The forgery comparison is asserted in three parts.

The inherited disturbance must return the pair on every seed, with its main comb clear of the band — so the essay cannot quietly rest on a weakened version of the result it is narrowing.

The shared one must return the pair on fewer than half the seeds and must produce a comb less than two-thirds of the inherited one’s, at the same coupling and the same scatter.

And raising the shared one’s coupling must not rescue it, checked at 0.7 and 0.9. That third assertion is the one that answers the objection this result invites, and it is checked at a coupling the rival cannot be run at.

Shares its objects with

Essays that name at least two of the same things, and that neither author linked.

  • The ratio was never about the rule — both name autocorrelation, discrimination, ensemble, evidence, falsifiability, honest limits, measurement, mechanism, noise, null model, parastichy pair, transport
  • A periodicity is not a lattice — both name artefact, autocorrelation, counting blind, discrimination, ensemble, evidence, lattice offset, measurement, noise, null model, parastichy pair
  • The control a survey would need — both name autocorrelation, counting blind, discrimination, evidence, falsifiability, honest limits, measurement, null model, parastichy pair, transport
  • What a forgery has to know — both name autocorrelation, discrimination, evidence, honest limits, lattice offset, measurement, noise, null model, parastichy pair, transport
  • The ablation a plant would survive — both name artefact, counting blind, discrimination, evidence, falsifiability, honest limits, measurement, null model, parastichy pair
  • A comb is evidence of a rule — both name autocorrelation, discrimination, evidence, falsifiability, measurement, mechanism, noise, parastichy pair

Named objects

A flat tag is an object no other essay names yet.

ArtefactAutocorrelationCounting blindDiscriminationEnsembleEvidenceFalsifiabilityHonest limitsLattice offsetMeasurementMechanismNoiseNull modelParastichy pairTransport